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1

Arabidopsis PCFS4, a homologue of yeast polyadenylation factor Pcf11p, regulates FCA alternative processing and promotes flowering time

Denghui Xing, Hongwei Zhao, Ruqiang Xu, Qingshun Quinn Li

Journal:

The Plant Journal

Year:

2008

Language:

english

File:

PDF, 532 KB

english, 2008

2

Increased pathogen resistance and yield in transgenic plants expressing combinations of the modified antimicrobial peptides based on indolicidin and magainin

Hongyan Xing, Christopher B. Lawrence, Orlando Chambers, H. Maelor Davies, Nicholas P. Everett, Qingshun Quinn Li

Journal:

Year:

2006

Language:

english

File:

PDF, 513 KB

english, 2006

3

[IEEE 2008 International Symposium on Information Science and Engineering (ISISE) - Shanghai (2008.12.20-2008.12.22)] 2008 International Symposium on Information Science and Engineering - Recognition of Plant mRNA Polyadenylation Sites Based on High-Dimensional Space Points' Covering Method

Guoli Ji,, Jianti Zheng,, Dan Zou,, Min Dong,, Qingshun Quinn Li,

Year:

2008

Language:

english

File:

PDF, 300 KB

english, 2008

4

The 73 kD Subunit of the cleavage and polyadenylation specificity factor (CPSF) complex affects reproductive development inArabidopsis

Ruqiang Xu, Hongwei Zhao, Randy D. Dinkins, Xiaowen Cheng, George Carberry, Qingshun Quinn Li

Journal:

Plant Molecular Biology

Year:

2006

Language:

english

File:

PDF, 727 KB

english, 2006

5

Arabidopsis CLP1-SIMILAR PROTEIN3, an Ortholog of Human Polyadenylation Factor CLP1, Functions in Gametophyte, Embryo, and Postembryonic Development

Denghui Xing, Hongwei Zhao and Qingshun Quinn Li

Journal:

PLANT PHYSIOLOGY

Year:

2008

Language:

english

File:

PDF, 2.46 MB

english, 2008

6

[IEEE 2008 3rd International Conference on Bio-Inspired Computing: Theories and Applications (BIC-TA 2008) - Adelaide, Australia (2008.09.28-2008.10.1)] 2008 3rd International Conference on Bio-Inspired Computing: Theories and Applications - Implementation of a classification-based prediction model for plant mRNA Poly(A) sites

Ji, Guoli, Wu, Xiaohui, Jiangyin Huang,, Li, Qingshun Quinn

Year:

2008

Language:

english

File:

PDF, 286 KB

english, 2008

7

[Methods in Molecular Biology] Polyadenylation in Plants Volume 1255 ||

Hunt, Arthur G., Li, Qingshun Quinn

Year:

2015

Language:

english

File:

PDF, 8.17 MB

english, 2015

8

[Methods in Molecular Biology] Polyadenylation in Plants Volume 1255 || Phage Display Library Screening for Identification of Interacting Protein Partners

Hunt, Arthur G., Li, Qingshun Quinn

Year:

2015

Language:

english

File:

PDF, 283 KB

english, 2015

9

HDA6 dependent chromatin deacetylation orchestrates mRNA polyadenylation

Lin, Juncheng, Hung, Fu-Yu, Ye, Congting, Hong, Liwei, Shih, Yuan-Hsin, Wu, Keqiang, Li, Qingshun Quinn

Journal:

Genome Research

Year:

2020

File:

PDF, 1.31 MB

2020

10

VAAPA: A web platform for visualization and analysis of alternative polyadenylation

Guan, Jinting, Fu, Jingyi, Wu, Mingcheng, Chen, Longteng, Ji, Guoli, Quinn Li, Qingshun, Wu, Xiaohui

Journal:

Computers in Biology and Medicine

Year:

2015

Language:

english

File:

PDF, 2.20 MB

english, 2015

11

APAtrap: identification and quantification of alternative polyadenylation sites from RNA-seq data

Ye, Congting, Long, Yuqi, Ji, Guoli, Li, Qingshun Quinn, Wu, Xiaohui

Journal:

Year:

2018

Language:

english

File:

PDF, 583 KB

english, 2018

12

Protocol: Streamline cloning of genes into binary vectors inAgrobacteriumvia the Gateway®TOPO vector system

Ruqiang Xu, Qingshun Quinn Li

Journal:

Year:

2008

Language:

english

File:

PDF, 703 KB

english, 2008

13

Distinct genome-wide alternative polyadenylation during the response to silicon availability in the marine diatom Thalassiosira pseudonana

Fu, Haihui, Wang, Peng, Wu, Xiaohui, Zhou, Xiaoxuan, Ji, Guoli, Shen, Yingjia, Gao, Yahui, Li, Qingshun Quinn, Liang, Junrong

Journal:

The Plant Journal

Year:

2019

Language:

english

File:

PDF, 879 KB

english, 2019

14

Identification of a plant-specific Zn2+-sensitive ribonuclease activity

Denghui Xing, Shuisong Ni, Michael A. Kennedy and Qingshun Quinn Li

Journal:

Year:

2009

Language:

english

File:

PDF, 1.39 MB

english, 2009

15

A RING-H2 zinc-finger protein geneRIE1is essential for seed development inArabidopsis

Ruqiang Xu, Qingshun Quinn Li

Journal:

Plant Molecular Biology

Year:

2003

Language:

english

File:

PDF, 673 KB

english, 2003

16

[IEEE 2009 First International Conference on Information Science and Engineering - Nanjing, China (2009.12.26-2009.12.28)] 2009 First International Conference on Information Science and Engineering - An AdaBoost Algorithm for the Identification of Arabidopsis Messenger RNA Polyadenylation Sites

Ji, Guoli, Zou, Dan, Zheng, Jianti, Li, Qingshun Quinn

Year:

2009

Language:

english

File:

PDF, 245 KB

english, 2009

17

Genome-wide dynamics of alternative polyadenylation in rice

Fu, Haihui, Yang, Dewei, Su, Wenyue, Ma, Liuyin, Shen, Yingjia, Ji, Guoli, Ye, Xingfu, Wu, Xiaohui, Li, Qingshun Quinn

Journal:

Genome Research

Year:

2016

Language:

english

File:

PDF, 2.34 MB

english, 2016

18

Compilation of mRNA Polyadenylation Signals in Arabidopsis Revealed a New Signal Element and Potential Secondary Structures

Johnny C. Loke, Eric A. Stahlberg, David G. Strenski, Brian J. Haas, Paul Chris Wood and Qingshun Quinn Li

Journal:

PLANT PHYSIOLOGY

Year:

2005

Language:

english

File:

PDF, 2.86 MB

english, 2005

19

[IEEE 2009 2nd International Conference on Biomedical Engineering and Informatics - Tianjin, China (2009.10.17-2009.10.19)] 2009 2nd International Conference on Biomedical Engineering and Informatics - PROBER: Segmentation and Differential Analysis Tool for Tiling Microarray Data

Ji, Guoli, Wu, Xiaohui, Xing, Denghui, Li, Qingshun Quinn

Year:

2009

Language:

english

File:

PDF, 323 KB

english, 2009

20

Alternative polyadenylation

Xing, Denghui, Quinn Li, Qingshun

Journal:

Plant Signaling & Behavior

Year:

2009

Language:

english

File:

PDF, 381 KB

english, 2009

21

Transcriptome Analyses of FY Mutants Reveal Its Role in mRNA Alternative Polyadenylation

Yu, Zhibo, Lin, Juncheng, Li, Qingshun Quinn

Journal:

Year:

2019

Language:

english

File:

PDF, 4.37 MB

english, 2019

22

Role of alternative polyadenylation dynamics in acute myeloid leukemia at single-cell resolution

Ye, Congting, Zhou, Qian, Hong, Yiling, Li, Qingshun Quinn

Journal:

Year:

2019

File:

PDF, 3.14 MB

2019

23

Alternative polyadenylation and gene expression regulation in plants

Denghui Xing, Qingshun Quinn Li

Journal:

Wiley Interdisciplinary Reviews: RNA

Year:

2011

Language:

english

File:

PDF, 237 KB

english, 2011

24

AtCPSF73-II gene encoding an Arabidopsis homolog of CPSF 73 kDa subunit is critical for early embryo development

Ruqiang Xu, Xinfu Ye, Qingshun Quinn Li

Journal:

Year:

2004

Language:

english

File:

PDF, 1.19 MB

english, 2004

25

A classification-based prediction model of messenger RNA polyadenylation sites

Guoli Ji, Xiaohui Wu, Yingjia Shen, Jiangyin Huang, Qingshun Quinn Li

Journal:

Journal of Theoretical Biology

Year:

2010

Language:

english

File:

PDF, 708 KB

english, 2010

26

[Methods in Molecular Biology] Polyadenylation in Plants Volume 1255 || Transient Expression Using Agroinfiltration to Study Polyadenylation in Plants

Hunt, Arthur G., Li, Qingshun Quinn

Year:

2015

Language:

english

File:

PDF, 836 KB

english, 2015

27

Predictive modeling of plant messenger RNA polyadenylation sites

Guoli Ji, Jianti Zheng, Yingjia Shen, Xiaohui Wu, Ronghan Jiang, Yun Lin, Johnny C Loke, Kimberly M Davis, Greg J Reese, Qingshun Quinn Li

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 1.40 MB

english, 2007

28

[IEEE 2009 First International Conference on Information Science and Engineering - Nanjing, China (2009.12.26-2009.12.28)] 2009 First International Conference on Information Science and Engineering - Data Analysis of Arabidopsis Tiling Array

Ji, Guoli, Wu, Shanshan, Wu, Xiaohui, Xing, Denghui, Li, Qingshun Quinn

Year:

2009

Language:

english

File:

PDF, 371 KB

english, 2009

29

Unique Features of Plant Cleavage and Polyadenylation Specificity Factor Revealed by Proteomic Studies

Hongwei Zhao, Denghui Xing and Qingshun Quinn Li

Journal:

PLANT PHYSIOLOGY

Year:

2009

Language:

english

File:

PDF, 2.17 MB

english, 2009

30

Identification of a plant-specific Zn2+-sensitive ribonuclease activity

Denghui Xing, Shuisong Ni, Michael A. Kennedy, Qingshun Quinn Li

Journal:

Year:

2009

Language:

english

File:

PDF, 357 KB

english, 2009

31

Modeling Plant mRNA Poly(A) Sites: Software Design and Implementation

Zheng, Jianti, Shen, Yingjia, Li, Qingshun Quinn, Ji, Guoli, Wu, Xiaohui

Journal:

Journal of Computational and Theoretical Nanoscience

Year:

2007

Language:

english

File:

PDF, 1.79 MB

english, 2007

32

Increased pathogen resistance and yield in transgenic plants expressing combinations of the modified antimicrobial peptides based on indolicidin and magainin

Hongyan Xing, Christopher B. Lawrence, Orlando Chambers, H. Maelor Davies, Nicholas P. Everett and Qingshun Quinn Li

Journal:

Year:

2006

Language:

english

File:

PDF, 2.42 MB

english, 2006

33

Differential alternative polyadenylation contributes to the developmental divergence between two rice subspecies Japonica and Indica

Zhou, Qian, Fu, Haihui, Yang, Dewei, Ye, Congting, Zhu, Sheng, Lin, Juncheng, Ye, Wenbin, Ji, Guoli, Ye, Xinfu, Wu, Xiaohui, Li, Qingshun Quinn

Journal:

The Plant Journal

Year:

2018

Language:

english

File:

PDF, 1.28 MB

english, 2018

34

Implementation of a Classification-Based Prediction Model for Plant mRNA Poly(A)Sites

Ji, Guoli, Wu, Xiaohui, Huang, Jiangyin, Quinn Li, Qingshun

Journal:

Journal of Computational and Theoretical Nanoscience

Year:

2010

Language:

english

File:

PDF, 3.43 MB

english, 2010

35

Silver nanoparticles induce neurotoxicity in a human embryonic stem cell-derived neuron and astrocyte network

Repar, Neza, Li, Hao, Aguilar, Jose S., Li, Qingshun Quinn, Drobne, Damjana, Hong, Yiling

Journal:

Year:

2018

Language:

english

File:

PDF, 2.00 MB

english, 2018

36

Genome-wide alternative polyadenylation dynamics in response to biotic and abiotic stresses in rice

Ye, Congting, Zhou, Qian, Wu, Xiaohui, Ji, Guoli, Li, Qingshun Quinn

Journal:

Ecotoxicology and Environmental Safety

Year:

2019

Language:

english

File:

PDF, 1.92 MB

english, 2019

37

Heat Shock Responsive Gene Expression Modulated by mRNA Poly(A) Tail Length

Wu, Xuan, Wang, Jie, Wu, Xiaohui, Hong, Yiling, Li, Qingshun Quinn

Journal:

Frontiers in Plant Science

Year:

2020

File:

PDF, 1.09 MB

2020

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